Cross-species Spinal Cord Atlas: GABAergic

Summary

Metadata

Dataset Type

Single. The file includes a single dataset whereby “dataset” means a single library or a set of technical replicates that can be combined without having to worry about the associated batch effect.

Total Cells

48,313

tissue

spinal cord

assay

10x multiome

disease

normal

organism

Macaca mulatta (24,331 cells)Mus musculus (22,403 cells)Homo sapiens (1,579 cells)

Cell Labels

Class

Description

Cell annotation set for Class

Annotation Method

manual

Cell Labels (2)

Cells (48,313)

GABAergic

47,969

GABA-Gluta

344

Cluster

Description

Cell annotation set for Cluster

Annotation Method

manual

Cell Labels (93)

Cells (48,313)

231

10,261

199

3,616

30

2,578

51

1,428

211

1,234

180

1,150

234

1,076

90

992

229

973

251

830

29

741

207

709

Group

Description

Cell annotation set for Group

Annotation Method

manual

Cell Labels (16)

Cells (48,313)

GABA-V-2

13,474

GABA-M-2

5,628

GABA-V-1

5,009

GABA-Dorsal-1

4,304

GABA-Dorsal-8

3,768

GABA-Dorsal-9

3,498

GABA-Dorsal-2

2,641

GABA-Dorsal-4

2,124

GABA-Dorsal-3

1,620

GABA-Dorsal-7

1,512

GABA-Dorsal-5

1,091

GABA-M-1

1,034

Subclass

Description

Cell annotation set for Subclass

Annotation Method

manual

Cell Labels (5)

Cells (48,313)

GABA-D

22,101

GABA-V

18,483

GABA-M

6,662

CSF-cNs

723

GABA-Gluta

344