Single cell atlas of the human retina - Retinal ganglion cell subclass

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Cell Metadata

HRGC5

Ontology Term: retinal ganglion cellCL:0000740
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: RGC, RGCs, ganglion cell of retina, gangliocyte
Category Class of which the cell type is a subclass.: retinal cellCL:0009004
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: ABI3BP, AC009623.1, ARG2, C1QTNF7, CC2D2A, CDCA2, CREB5, FAM184B, KLRD1
Canonical Marker Genes: unknown
Rationale: 48.6%scRNA_MG-OFF23.0%scRNA_MG-ON of the Sanes dataset;60.3%nShekhar_MG_OFF+28.6%nShekhar_MG_ON of the Shekhar dataset;89.2%macaque_RGC12 of the macaque dataset;99.7%mouse_16_ooDS_DV of the mouse dataset;Known markers are curated from human, macaque and mouse markers.

Set of Labels Description: A total of 15 retinal ganglion cell clusters is identified from over 99K retinal ganglion cell nulcei in the current atlas. Utilizing previoulsy characterized markers from macaque, 5 clusters can be annotated.
Annotation Method: manual

Ontology Term: retinal ganglion cellCL:0000740
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: RGC, RGCs, ganglion cell of retina, gangliocyte
Category Class of which the cell type is a subclass.: retinal cellCL:0009004
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: ABI3BP, AC009623.1, ARG2, C1QTNF7, CC2D2A, CDCA2, CREB5, FAM184B, KLRD1
Canonical Marker Genes: unknown
Rationale: 48.6%scRNA_MG-OFF23.0%scRNA_MG-ON of the Sanes dataset;60.3%nShekhar_MG_OFF+28.6%nShekhar_MG_ON of the Shekhar dataset;89.2%macaque_RGC12 of the macaque dataset;99.7%mouse_16_ooDS_DV of the mouse dataset;Known markers are curated from human, macaque and mouse markers.

Set of Labels Description: A total of 15 retinal ganglion cell clusters is identified from over 99K retinal ganglion cell nulcei in the current atlas. Utilizing previoulsy characterized markers from macaque, 5 clusters can be annotated.
Annotation Method: manual