Single cell atlas of the human retina - Retinal ganglion cell subclass

Main

Cell Metadata

HRGC4

Ontology Term: retinal ganglion cellCL:0000740
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: ganglion cell of retina, gangliocyte, RGCs, RGC
Category Class of which the cell type is a subclass.: retinal cellCL:0009004
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: ABCA7, MC1R, CUSTOM3
Canonical Marker Genes: unknown
Rationale: 17.2%scRNA_MG-ON of the Sanes dataset;56.0%macaque_RGC9 of the macaque dataset;94.5%mouse_23_W3D2 of the mouse dataset;Known markers are curated from human, macaque and mouse markers.

Set of Labels Description: A total of 15 retinal ganglion cell clusters is identified from over 99K retinal ganglion cell nulcei in the current atlas. Utilizing previoulsy characterized markers from macaque, 5 clusters can be annotated.
Annotation Method: manual

Main

Cell Metadata

Ontology Term: retinal ganglion cellCL:0000740
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: ganglion cell of retina, gangliocyte, RGCs, RGC
Category Class of which the cell type is a subclass.: retinal cellCL:0009004
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: ABCA7, MC1R, CUSTOM3
Canonical Marker Genes: unknown
Rationale: 17.2%scRNA_MG-ON of the Sanes dataset;56.0%macaque_RGC9 of the macaque dataset;94.5%mouse_23_W3D2 of the mouse dataset;Known markers are curated from human, macaque and mouse markers.

Set of Labels Description: A total of 15 retinal ganglion cell clusters is identified from over 99K retinal ganglion cell nulcei in the current atlas. Utilizing previoulsy characterized markers from macaque, 5 clusters can be annotated.
Annotation Method: manual