Single cell atlas of the human retina - Retinal ganglion cell subclass

HRGC15

Ontology Term

retinal ganglion cellCL:0000740

Synonyms

Terms that have the same, or nearly the same, meaning as the selected cell type.

ganglion cell of retina, gangliocyte, RGCs, RGC

Category

Class of which the cell type is a subclass.

retinal cellCL:0009004

Ontology Assessment

Disagreements with any aspect of the Cell Ontology.

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Marker Gene Evidence

Gene markers used by researcher to assign this cell annotation.

AC007563.2, ADRA1A, ARPP21, CDH8, GSE1, PDXK, SORCS2, ZNF385B

Canonical Marker Genes

unknown

Rationale

93.9%scRNA_PG-ON of the Sanes dataset;30.3%nShekhar_PG_ON of the Shekhar dataset;33.3%macaque_PG_ON+18.2%macaque_RGC16 of the macaque dataset;42.4%mouse_39_Novel+12.1%mouse_12_ooDS_NT of the mouse dataset;Known markers are curated from human, macaque and mouse markers.

Inherited from author_cell_type

Set of Labels Description

A total of 15 retinal ganglion cell clusters is identified from over 99K retinal ganglion cell nulcei in the current atlas. Utilizing previoulsy characterized markers from macaque, 5 clusters can be annotated.

Annotation Method

manual