Single cell atlas of the human retina - Retinal ganglion cell subclass

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Cell Metadata

HRGC13

Ontology Term: retinal ganglion cellCL:0000740
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: ganglion cell of retina, gangliocyte, RGCs, RGC
Category Class of which the cell type is a subclass.: retinal cellCL:0009004
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: MYO18A, MIR1-1HG, SRRM1
Canonical Marker Genes: unknown
Rationale: 94.4%scRNA_PG-OFF of the Sanes dataset;97.2%nShekhar_RGC4 of the Shekhar dataset;76.9%macaque_PG_OFF of the macaque dataset;82.9%mouse_34_Novel of the mouse dataset;Known markers are curated from human, macaque and mouse markers.

Set of Labels Description: A total of 15 retinal ganglion cell clusters is identified from over 99K retinal ganglion cell nulcei in the current atlas. Utilizing previoulsy characterized markers from macaque, 5 clusters can be annotated.
Annotation Method: manual

Ontology Term: retinal ganglion cellCL:0000740
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: ganglion cell of retina, gangliocyte, RGCs, RGC
Category Class of which the cell type is a subclass.: retinal cellCL:0009004
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: MYO18A, MIR1-1HG, SRRM1
Canonical Marker Genes: unknown
Rationale: 94.4%scRNA_PG-OFF of the Sanes dataset;97.2%nShekhar_RGC4 of the Shekhar dataset;76.9%macaque_PG_OFF of the macaque dataset;82.9%mouse_34_Novel of the mouse dataset;Known markers are curated from human, macaque and mouse markers.

Set of Labels Description: A total of 15 retinal ganglion cell clusters is identified from over 99K retinal ganglion cell nulcei in the current atlas. Utilizing previoulsy characterized markers from macaque, 5 clusters can be annotated.
Annotation Method: manual