Single cell atlas of the human retina - Retinal ganglion cell subclass

HRGC11

Ontology Term

retinal ganglion cellCL:0000740

Synonyms

Terms that have the same, or nearly the same, meaning as the selected cell type.

ganglion cell of retina, gangliocyte, RGCs, RGC

Category

Class of which the cell type is a subclass.

retinal cellCL:0009004

Ontology Assessment

Disagreements with any aspect of the Cell Ontology.

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Marker Gene Evidence

Gene markers used by researcher to assign this cell annotation.

AFF2, AL109930.1, AL589740.1, COL25A1, FOXP2, NRP1, NOS1AP, PPFIBP1, PTPRR, SATB2, RPH3A, TSHZ2

Canonical Marker Genes

unknown

Rationale

85.1%nShekhar_RGC5 of the Shekhar dataset;15.9%macaque_RGC12 of the macaque dataset;52.6%mouse_20_Novel13.8%mouse_28_FmidiOFF+11.5%mouse_29_Novel of the mouse dataset;Known markers are curated from human, macaque and mouse markers.

Inherited from author_cell_type

Set of Labels Description

A total of 15 retinal ganglion cell clusters is identified from over 99K retinal ganglion cell nulcei in the current atlas. Utilizing previoulsy characterized markers from macaque, 5 clusters can be annotated.

Annotation Method

manual