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Lymphoid cells from human liver dataset | CAP

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Lymphoid cells from human liver dataset

Main

Cell Metadata

author_cell_type

Lymphoid cells from human liver dataset

B cells

Ontology Term: B cellCL:0000236
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: B lymphocyte
Category Class of which the cell type is a subclass.: lymphocyte of B lineageCL:0000945
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: AC079767.4, FCRL1, PAX5, VPREB3, CD22

, RP11-693J15.5

Canonical Marker Genes

CD19, PAX5, CD79A

Negative Marker Genes

Genes expected to be absent, or expressed at a notably low level, in these cells, and whose absence supports the assignment of this cell annotation.

—

Rationale

Marker genes are top 10 DEGs for this population compared with rest of UMAP (from Table S5 in publication).

Inherited from author_cell_type

Set of Labels Description: Annotation of cell types in dataset based on prior knowledge
Annotation Method: manual