Multiplexed scRNA-seq of 1.2 million PBMCs from adult lupus samples

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Cell Metadata

plasmacytoid dendritic cell

Ontology Term: plasmacytoid dendritic cellCL:0000784
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: pDC, T-associated plasma cell, lymphoid dendritic cell, plasmacytoid monocyte, plasmacytoid T cell, type 2 DC
Category Class of which the cell type is a subclass.: dendritic cellCL:0000451
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: PLD4, SERPINF1, LILRA4
Canonical Marker Genes: HLA-DR
Rationale: NA

Set of Labels Description: 1.2 million PBMCs from 162 SLE cases and 99 healthy controls of either Asian or European ancestry were profiled using mux-seq.
Annotation Method: manual

Ontology Term: plasmacytoid dendritic cellCL:0000784
Synonyms Terms that have the same, or nearly the same, meaning as the selected cell type.: pDC, T-associated plasma cell, lymphoid dendritic cell, plasmacytoid monocyte, plasmacytoid T cell, type 2 DC
Category Class of which the cell type is a subclass.: dendritic cellCL:0000451
Ontology Assessment Disagreements with any aspect of the Cell Ontology.: —
Marker Gene Evidence Gene markers used by researcher to assign this cell annotation.: PLD4, SERPINF1, LILRA4
Canonical Marker Genes: HLA-DR
Rationale: NA

Set of Labels Description: 1.2 million PBMCs from 162 SLE cases and 99 healthy controls of either Asian or European ancestry were profiled using mux-seq.
Annotation Method: manual