Single cell atlas of the human retina - Retinal ganglion cell subclass

PG_OFF

Ontology Term

parasol ganglion cell of retinaCL:4023189

Synonyms

Terms that have the same, or nearly the same, meaning as the selected cell type.

M cell, M ganglion cell

Category

Class of which the cell type is a subclass.

parasol retinal ganglion cellCL:4023189

Ontology Assessment

Disagreements with any aspect of the Cell Ontology.

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Marker Gene Evidence

Gene markers used by researcher to assign this cell annotation.

AIM2, C8orf34, CDH4, CHSY3, COL24A1, FHOD3, FLRT2, GALNT14, MCC, KCNQ5, KCNIP1, MGAT5B, PLCL1, STXBP6, SORCS3, WWC1, USH2A, TESC

Canonical Marker Genes

unknown

Rationale

98.4%scRNA_PG-OFF of the Sanes dataset;99.7%nShekhar_PG_OFF of the Shekhar dataset;47.5%macaque_RGC1721.3%macaque_MG_ON of the macaque dataset;74.2%mouse_15_Novel10.8%mouse_3_FminiON of the mouse dataset;Known markers are curated from human, macaque and mouse markers.

Inherited from author_cell_type

Set of Labels Description

A total of 15 retinal ganglion cell clusters is identified from over 99K retinal ganglion cell nulcei in the current atlas. Utilizing previoulsy characterized markers from macaque, 5 clusters can be annotated.

Annotation Method

manual